STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107782080CRIB domain-containing protein RIC10-like. (155 aa)    
Predicted Functional Partners:
LOC107830091
Pollen-specific leucine-rich repeat extensin-like protein 1.
  
     0.513
LOC107782891
Pollen-specific leucine-rich repeat extensin-like protein 1.
  
     0.509
LOC107771973
Protein SRC2 homolog.
  
     0.508
LOC107816744
Uncharacterized protein LOC107816744.
  
     0.507
LOC107814393
Putative cyclin-D6-1.
  
     0.504
LOC107822267
Uncharacterized protein LOC107822267.
  
     0.500
LOC107827727
FK506-binding protein 4-like.
  
     0.500
LOC107761314
Uncharacterized protein LOC107761314.
  
     0.496
LOC107809234
Uncharacterized protein LOC107809234.
  
     0.496
LOC107787455
FK506-binding protein 4-like.
  
     0.495
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.