STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107782413Putative FBD-associated F-box protein At5g56690. (264 aa)    
Predicted Functional Partners:
LOC107791690
F-box/FBD/LRR-repeat protein At1g13570-like.
  
     0.530
LOC107768598
BAG family molecular chaperone regulator 7-like.
  
     0.519
LOC107764436
F-box/FBD/LRR-repeat protein At1g13570-like.
  
     0.518
LOC107828980
BAG family molecular chaperone regulator 7-like.
  
     0.518
LOC107818811
F-box/FBD/LRR-repeat protein At1g13570-like.
  
     0.513
LOC107787999
F-box/FBD/LRR-repeat protein At1g13570-like.
  
     0.502
LOC107771613
F-box/FBD/LRR-repeat protein At1g13570-like isoform X1.
  
     0.493
LOC107819566
F-box/FBD/LRR-repeat protein At1g13570-like.
  
     0.487
LOC107771441
Peroxisomal membrane protein PEX14-like.
  
     0.485
EC1
Egg cell-secreted protein 1.4-like.
  
     0.484
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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