STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107782964Beta-glucosidase BoGH3B-like. (661 aa)    
Predicted Functional Partners:
LOC107800052
Endoglucanase.
   
  0.682
LOC107823613
Endoglucanase.
   
  0.682
LOC107763332
Endoglucanase.
    
  0.668
LOC107765734
Endoglucanase.
    
  0.668
LOC107770096
Endoglucanase.
    
  0.668
LOC107774012
Endoglucanase.
    
  0.668
LOC107775257
Endoglucanase.
    
  0.668
LOC107776220
Endoglucanase.
    
  0.668
LOC107778715
Endoglucanase.
    
  0.668
LOC107785642
Endoglucanase.
    
  0.668
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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