STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107782927Transcription factor TGA7-like. (246 aa)    
Predicted Functional Partners:
LOC107821544
Zinc finger protein 4-like.
  
     0.461
LOC107819513
Zinc finger protein ZAT3-like.
  
     0.446
LOC107798862
Protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X1.
  
     0.445
LOC107807433
Uncharacterized protein LOC107807433 isoform X1.
  
     0.442
LOC107782307
Uncharacterized protein LOC107782307.
  
     0.440
LOC107794929
Protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X1.
  
     0.438
LOC107802891
VAN3-binding protein-like.
  
     0.436
LOC107761287
Zinc finger protein 4-like.
  
     0.435
LOC107770419
VAN3-binding protein-like.
  
     0.433
LOC107812802
Uncharacterized protein LOC107812802.
  
     0.428
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.