Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC107761481 | LOC107762664 | A0A1S3X643 | A0A1S3X9T5 | Sm-like protein LSM36B. | Protein STABILIZED1-like. | 0.968 |
LOC107761481 | LOC107765381 | A0A1S3X643 | A0A1S3XHX0 | Sm-like protein LSM36B. | Sm-like protein LSM7. | 0.999 |
LOC107761481 | LOC107774569 | A0A1S3X643 | A0A1S3YBJ9 | Sm-like protein LSM36B. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
LOC107761481 | LOC107783792 | A0A1S3X643 | A0A1S3Z7B1 | Sm-like protein LSM36B. | Zinc finger matrin-type protein 2-like isoform X3. | 0.962 |
LOC107761481 | LOC107791059 | A0A1S3X643 | A0A1S3ZW41 | Sm-like protein LSM36B. | Protein STABILIZED1-like. | 0.968 |
LOC107761481 | LOC107808711 | A0A1S3X643 | A0A1S4BIP4 | Sm-like protein LSM36B. | Microfibrillar-associated protein 1-like. | 0.843 |
LOC107761481 | LOC107815942 | A0A1S3X643 | A0A1S4C7F5 | Sm-like protein LSM36B. | Protein STABILIZED1. | 0.968 |
LOC107761481 | LOC107817798 | A0A1S3X643 | A0A1S4CDX0 | Sm-like protein LSM36B. | Microfibrillar-associated protein 1-like. | 0.843 |
LOC107761481 | LOC107824911 | A0A1S3X643 | A0A1S4D192 | Sm-like protein LSM36B. | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | 0.999 |
LOC107761481 | LOC107825164 | A0A1S3X643 | A0A1S4D2C9 | Sm-like protein LSM36B. | Small nuclear ribonucleoprotein-associated protein. | 0.990 |
LOC107762664 | LOC107761481 | A0A1S3X9T5 | A0A1S3X643 | Protein STABILIZED1-like. | Sm-like protein LSM36B. | 0.968 |
LOC107762664 | LOC107765381 | A0A1S3X9T5 | A0A1S3XHX0 | Protein STABILIZED1-like. | Sm-like protein LSM7. | 0.975 |
LOC107762664 | LOC107774569 | A0A1S3X9T5 | A0A1S3YBJ9 | Protein STABILIZED1-like. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.976 |
LOC107762664 | LOC107783792 | A0A1S3X9T5 | A0A1S3Z7B1 | Protein STABILIZED1-like. | Zinc finger matrin-type protein 2-like isoform X3. | 0.949 |
LOC107762664 | LOC107791059 | A0A1S3X9T5 | A0A1S3ZW41 | Protein STABILIZED1-like. | Protein STABILIZED1-like. | 0.543 |
LOC107762664 | LOC107808711 | A0A1S3X9T5 | A0A1S4BIP4 | Protein STABILIZED1-like. | Microfibrillar-associated protein 1-like. | 0.965 |
LOC107762664 | LOC107815942 | A0A1S3X9T5 | A0A1S4C7F5 | Protein STABILIZED1-like. | Protein STABILIZED1. | 0.543 |
LOC107762664 | LOC107817798 | A0A1S3X9T5 | A0A1S4CDX0 | Protein STABILIZED1-like. | Microfibrillar-associated protein 1-like. | 0.965 |
LOC107762664 | LOC107824911 | A0A1S3X9T5 | A0A1S4D192 | Protein STABILIZED1-like. | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | 0.975 |
LOC107762664 | LOC107825164 | A0A1S3X9T5 | A0A1S4D2C9 | Protein STABILIZED1-like. | Small nuclear ribonucleoprotein-associated protein. | 0.987 |
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