STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107784959Putative vesicle-associated membrane protein 726; Belongs to the synaptobrevin family. (220 aa)    
Predicted Functional Partners:
LOC107798867
Vacuolar protein-sorting-associated protein 33 homolog; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.684
LOC107822287
Vacuolar protein-sorting-associated protein 33 homolog; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.684
LOC107764518
SNAP25 homologous protein SNAP33.
   
 0.645
LOC107771408
Putative SNAP25 homologous protein SNAP30.
   
 0.645
LOC107825405
Putative SNAP25 homologous protein SNAP30.
   
 0.645
LOC107827510
SNAP25 homologous protein SNAP33-like.
   
 0.645
LOC107830347
SNAP25 homologous protein SNAP33-like.
   
 0.645
LOC107832072
SNAP25 homologous protein SNAP33-like.
   
 0.645
LOC107774060
Centrosomal protein of 83 kDa-like isoform X1.
    
 0.613
LOC107815992
Hyaluronan mediated motility receptor-like isoform X1.
    
 0.613
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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