STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107785023UPF0481 protein At3g47200-like. (522 aa)    
Predicted Functional Partners:
LOC107800554
Uncharacterized protein LOC107800554.
  
     0.539
LOC107773156
Transcription factor bHLH149-like.
  
     0.538
LOC107806261
Transcription factor bHLH149-like.
  
     0.536
LOC107766516
Uncharacterized protein LOC107766516 isoform X1.
  
     0.535
LOC107764964
F-box protein PP2-B10-like.
  
     0.534
LOC107789577
Uncharacterized protein LOC107789577 isoform X1.
  
     0.533
LOC107784240
Uncharacterized protein LOC107784240.
  
     0.532
LOC107825526
Uncharacterized protein LOC107825526 isoform X1.
  
     0.532
LOC107827038
Uncharacterized protein LOC107827038.
  
     0.532
LOC107785904
Uncharacterized protein LOC107785904.
  
     0.531
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.