STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107785165Tetraspanin-8-like. (149 aa)    
Predicted Functional Partners:
LOC107768424
LOB domain-containing protein 7-like.
  
     0.507
LOC107772788
65-kDa microtubule-associated protein 3-like.
  
     0.484
LOC107808985
Uncharacterized protein LOC107808985.
  
     0.484
LOC107770039
Uncharacterized protein LOC107770039.
  
     0.483
LOC107805785
Transcription factor bHLH130-like.
  
     0.483
LOC107773958
Uncharacterized protein LOC107773958.
  
     0.475
LOC107773777
AT-hook motif nuclear-localized protein 1-like.
  
     0.472
LOC107820969
Transcription factor bHLH130-like.
  
     0.470
LOC107767507
Uncharacterized protein LOC107767507.
  
     0.464
LOC107794891
Zinc-finger homeodomain protein 2-like.
  
     0.464
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.