STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107786099Mulatexin-like. (164 aa)    
Predicted Functional Partners:
LOC107777558
Cullin-associated NEDD8-dissociated protein 1-like.
   
 
 0.670
LOC107804026
Cullin-associated NEDD8-dissociated protein 1-like isoform X1.
   
 
 0.670
LOC107773228
NEDD8-activating enzyme E1 catalytic subunit-like.
    
 0.658
LOC107807583
NEDD8-activating enzyme E1 catalytic subunit-like.
    
 0.658
LOC107811436
NEDD8-activating enzyme E1 catalytic subunit.
    
 0.658
LOC107776609
NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric E1 enzyme. E1 activates RUB1/NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a RUB1-ECR1 thioester and free AMP. E1 finally transfers RUB1 to the catalytic cysteine of RCE1. Belongs to the ubiquitin-activating E1 family. ULA1 subfamily.
    
 0.634
LOC107804050
NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric E1 enzyme. E1 activates RUB1/NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a RUB1-ECR1 thioester and free AMP. E1 finally transfers RUB1 to the catalytic cysteine of RCE1. Belongs to the ubiquitin-activating E1 family. ULA1 subfamily.
    
 0.634
LOC107789763
Transcription elongation factor B polypeptide 1-like; Belongs to the SKP1 family.
     
 0.589
LOC107764019
SKP1-like protein 1B; Belongs to the SKP1 family.
    
 0.581
LOC107766968
SKP1-like protein 11; Belongs to the SKP1 family.
    
 0.581
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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