STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107786319Uncharacterized protein LOC107786319. (149 aa)    
Predicted Functional Partners:
LOC107793021
Uncharacterized protein LOC107793021.
  
     0.499
LOC107793644
Uncharacterized protein LOC107793644.
  
     0.494
LOC107764126
Uncharacterized protein LOC107764126.
  
     0.492
LOC107781094
Uncharacterized protein LOC107781094.
  
     0.487
LOC107822674
Uncharacterized protein LOC107822674.
  
     0.487
LOC107803320
Uncharacterized protein LOC107803320.
  
     0.486
LOC107775941
Uncharacterized protein LOC107775941.
  
     0.481
LOC107807550
Uncharacterized protein LOC107807550.
  
     0.475
LOC107760077
Uncharacterized protein LOC107760077.
  
     0.471
LOC107814251
Uncharacterized protein LOC107814251.
  
     0.465
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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