STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107786370Uncharacterized protein LOC107786370. (370 aa)    
Predicted Functional Partners:
LOC107799647
Uncharacterized protein LOC107799647.
  
     0.523
LOC107832345
Uncharacterized protein LOC107832345.
  
     0.520
LOC107799303
Uncharacterized protein LOC107799303.
  
     0.513
LOC107805479
Uncharacterized mitochondrial protein AtMg00820-like.
  
     0.506
LOC107781705
Uncharacterized protein LOC107781705.
  
     0.505
LOC107796600
Uncharacterized protein LOC107796600.
  
     0.505
LOC107788322
Uncharacterized protein LOC107788322.
  
     0.503
LOC107822268
Uncharacterized protein LOC107822268.
  
     0.502
LOC107822764
Uncharacterized mitochondrial protein AtMg00820-like.
  
     0.500
LOC107784511
Uncharacterized protein LOC107784511.
  
     0.499
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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