STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107786459Protein BRASSINAZOLE-RESISTANT 1-like. (332 aa)    
Predicted Functional Partners:
LOC107772792
Shaggy-related protein kinase eta-like; Belongs to the protein kinase superfamily.
    
 0.810
LOC107773738
Shaggy-related protein kinase eta-like; Belongs to the protein kinase superfamily.
    
 0.810
LOC107790647
Shaggy-related protein kinase eta-like; Belongs to the protein kinase superfamily.
    
 0.810
LOC107801038
Shaggy-related protein kinase eta isoform X1; Belongs to the protein kinase superfamily.
    
 0.810
LOC107809264
Shaggy-related protein kinase eta; Belongs to the protein kinase superfamily.
    
 0.810
LOC107772919
Protein NBR1 homolog.
      
 0.560
LOC107781766
Protein NBR1 homolog.
      
 0.560
LOC107791306
Protein NBR1 homolog.
      
 0.560
LOC107828388
Protein NBR1 homolog.
      
 0.560
LOC107775759
Probable lysine-specific demethylase ELF6.
    
 
 0.540
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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