STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107787592Uncharacterized protein LOC107787592 isoform X1. (1258 aa)    
Predicted Functional Partners:
LOC107766765
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.977
LOC107793580
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.977
LOC107798403
Cleavage stimulation factor subunit 77-like isoform X1.
    
 0.973
LOC107827044
Cleavage stimulation factor subunit 77-like isoform X1.
    
 0.973
LOC107808858
Cleavage stimulating factor 64.
   
 0.970
LOC107811588
Cleavage stimulating factor 64-like isoform X1.
   
 0.970
LOC107787003
Flowering time control protein FY-like isoform X1.
    
 0.961
LOC107813173
Flowering time control protein FY-like.
    
 0.961
LOC107814452
Flowering time control protein FY-like.
    
 0.961
LOC107766678
FIP1[III]-like protein isoform X1.
    
 0.956
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
Server load: low (10%) [HD]