STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107788592Uncharacterized protein LOC107788592 isoform X1. (357 aa)    
Predicted Functional Partners:
LOC107822987
Uncharacterized protein LOC107822987.
      
 0.571
LOC107815098
Uncharacterized protein LOC107815098.
  
     0.512
LOC107774051
Uncharacterized protein LOC107774051.
  
     0.505
LOC107803453
Uncharacterized protein LOC107803453.
  
     0.504
LOC107765321
Uncharacterized protein LOC107765321.
  
     0.497
LOC107795815
Uncharacterized protein LOC107795815.
  
     0.497
LOC107802725
Uncharacterized protein LOC107802725 isoform X1.
  
     0.488
LOC107808807
Uncharacterized protein LOC107808807.
  
     0.487
LOC107788784
Transcription factor bHLH49-like.
  
     0.481
LOC107805132
Uncharacterized protein LOC107805132.
  
     0.475
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.