STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC1077887072-hydroxyisoflavanone dehydratase-like. (317 aa)    
Predicted Functional Partners:
LOC107806941
L-galactono-1,4-lactone dehydrogenase, mitochondrial-like.
   
 
 0.740
LOC107778136
Xanthoxin dehydrogenase-like.
   
  
 0.643
LOC107797480
EID1-like F-box protein 3.
      
 0.634
LOC107799395
EID1-like F-box protein 3.
      
 0.634
zgt
Circadian clock coupling factor ZGT.
      
 0.634
LOC107813002
Tetraketide alpha-pyrone reductase 1 isoform X1; Belongs to the 3-beta-HSD family.
   
  
 0.632
LOC107787357
L-galactono-1,4-lactone dehydrogenase, mitochondrial-like.
   
 
 0.625
GLDHase
L-galactono-1,4-lactone dehydrogenase, mitochondrial-like.
   
 
 0.625
LOC107760487
Xanthoxin dehydrogenase-like.
   
  
 0.582
LOC107765752
Xanthoxin dehydrogenase-like.
   
  
 0.582
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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