STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107789636Uncharacterized protein LOC107789636. (496 aa)    
Predicted Functional Partners:
LOC107779743
Uncharacterized protein LOC107779743.
  
     0.491
LOC107804102
Uncharacterized protein LOC107804102.
  
     0.482
LOC107759050
Uncharacterized protein LOC107759050.
  
     0.477
LOC107803870
Uncharacterized protein LOC107803870.
  
     0.475
LOC107813564
Uncharacterized protein LOC107813564.
  
     0.475
LOC107769412
Uncharacterized protein LOC107769412.
  
     0.458
LOC107776838
Uncharacterized protein LOC107776838.
  
     0.458
LOC107832205
Uncharacterized protein LOC107832205.
  
     0.448
LOC107783119
Uncharacterized protein LOC107783119.
  
     0.447
LOC107830159
Uncharacterized protein LOC107830159.
  
     0.447
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.