STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107791755Protein IQ-DOMAIN 1-like isoform X1. (576 aa)    
Predicted Functional Partners:
LOC107779467
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.509
LOC107779595
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.506
LOC107788073
Uncharacterized protein LOC107788073.
  
     0.452
LOC107806750
Uncharacterized protein LOC107806750 isoform X1.
  
     0.451
LOC107764224
Uncharacterized protein At4g19900-like.
  
     0.450
LOC107825514
Protein NAP1-like.
  
     0.450
LOC107776150
Protein NAP1-like.
  
     0.447
LOC107817255
Uncharacterized protein LOC107817255.
  
     0.438
LOC107777914
Uncharacterized protein LOC107777914 isoform X1.
  
     0.436
LOC107816568
Uncharacterized protein LOC107816568.
  
     0.436
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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