STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107791758Probable complex I intermediate-associated protein 30. (227 aa)    
Predicted Functional Partners:
LOC107770117
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B.
   
 0.988
LOC107780481
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like.
    
 0.983
LOC107789341
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
    
 0.983
LOC107791144
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
    
 0.983
LOC107829281
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like.
    
 0.983
nad9
NADH dehydrogenase subunit 9; Belongs to the complex I 30 kDa subunit family.
   
 0.981
ndhJ
NADH-quinone oxidoreductase subunit C; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Belongs to the complex I 30 kDa subunit family.
   
 0.981
LOC107802400
Uncharacterized protein LOC107802400 isoform X1.
    
 0.976
LOC107827295
Uncharacterized protein LOC107827295 isoform X1.
    
 0.976
LOC107772897
NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial-like.
   
 0.966
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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