STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107793011Protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like. (283 aa)    
Predicted Functional Partners:
LOC107763283
Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family.
    
 
 0.905
LOC107793690
Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family.
    
 
 0.815
LOC107824182
Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family.
    
 
 0.815
GluTRBP1
glutamyl-tRNA reductase-binding protein, chloroplastic-like.
   
 
 0.766
GluTRBP2
glutamyl-tRNA reductase-binding protein, chloroplastic-like.
   
 
 0.766
LOC107791047
Photosystem II D1 precursor processing protein PSB27-H2, chloroplastic-like.
  
     0.435
LOC107814208
Photosystem II D1 precursor processing protein PSB27-H2, chloroplastic-like isoform X1.
  
     0.435
LOC107772223
Uncharacterized protein LOC107772223.
  
    0.414
LOC107765704
Uncharacterized protein LOC107765704.
  
    0.400
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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