STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107793450Syntaxin-81-like isoform X1. (317 aa)    
Predicted Functional Partners:
LOC107770677
Uncharacterized protein LOC107770677 isoform X1.
   
 0.991
LOC107786363
Uncharacterized protein LOC107786363.
   
 0.991
LOC107793376
Uncharacterized protein LOC107793376 isoform X1.
   
 0.991
LOC107768686
Uncharacterized protein LOC107768686.
    
 0.987
LOC107796310
Uncharacterized protein LOC107796310.
    
 0.987
LOC107812449
Uncharacterized protein LOC107812449 isoform X1.
    
 0.987
LOC107767125
Centromere/kinetochore protein zw10 homolog.
    
 0.974
LOC107826424
Centromere/kinetochore protein zw10 homolog.
    
 0.974
LOC107772469
Syntaxin-31-like; Belongs to the syntaxin family.
   
 0.970
LOC107780932
Syntaxin-32-like; Belongs to the syntaxin family.
   
 0.970
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.