STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107793482Uncharacterized protein LOC107793482. (193 aa)    
Predicted Functional Partners:
LOC107832094
Uncharacterized protein LOC107832094.
  
     0.461
LOC107822989
Uncharacterized protein LOC107822989.
  
     0.441
LOC107764004
Uncharacterized protein LOC107764004.
  
     0.433
LOC107792228
Uncharacterized protein LOC107792228.
  
     0.429
LOC107776727
Uncharacterized protein LOC107776727.
  
     0.425
LOC107792375
Uncharacterized protein LOC107792375.
  
     0.425
LOC107784771
Uncharacterized protein LOC107784771.
  
     0.422
LOC107799826
Uncharacterized protein LOC107799826.
  
     0.414
LOC107822579
Uncharacterized protein LOC107822579.
  
     0.413
LOC107790635
Uncharacterized protein LOC107790635.
  
     0.410
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.