STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107793902Uncharacterized protein LOC107793902. (427 aa)    
Predicted Functional Partners:
LOC107823642
Protein CROWDED NUCLEI 2-like.
  
     0.535
LOC107785967
Uncharacterized protein LOC107785967.
  
     0.531
LOC107807164
Uncharacterized protein LOC107807164.
  
     0.531
LOC107800877
Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1-like.
  
     0.506
LOC107795842
Uncharacterized protein LOC107795842 isoform X1.
  
     0.505
LOC107778213
Uncharacterized protein LOC107778213.
  
     0.504
LOC107800432
Uncharacterized protein LOC107800432.
  
     0.503
LOC107823575
Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1-like.
  
     0.503
LOC107805121
Uncharacterized protein LOC107805121.
  
     0.502
LOC107831096
Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1-like.
  
     0.499
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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