STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107794192Uncharacterized protein LOC107794192. (131 aa)    
Predicted Functional Partners:
LOC107824663
GDSL esterase/lipase At1g29660-like.
  
     0.525
CYS7
Cysteine proteinase inhibitor; Belongs to the cystatin family. Phytocystatin subfamily.
  
     0.524
LOC107807834
Uncharacterized protein LOC107807834.
  
     0.517
LOC107764662
Uncharacterized protein At5g01610-like.
  
     0.516
LOC107768265
Uncharacterized protein At5g01610-like.
  
     0.516
LOC107810452
COBRA-like protein; Belongs to the COBRA family.
  
     0.516
LOC107783718
Uncharacterized protein LOC107783718.
  
     0.513
LOC107817355
Uncharacterized protein At1g04910-like.
  
     0.513
LOC107822059
Uncharacterized protein At1g04910-like.
  
     0.513
LOC107762520
Uncharacterized protein LOC107762520.
  
     0.511
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.