STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107794156Uncharacterized protein At4g26450. (710 aa)    
Predicted Functional Partners:
LOC107781897
Uncharacterized protein LOC107781897.
  
     0.513
LOC107789646
Uncharacterized protein LOC107789646 isoform X1.
  
     0.512
LOC107807737
Uncharacterized protein LOC107807737.
  
     0.511
LOC107809324
Uncharacterized protein LOC107809324.
  
     0.511
LOC107792985
Uncharacterized protein LOC107792985.
  
     0.507
LOC107782726
Uncharacterized protein LOC107782726.
  
     0.495
LOC107794997
Uncharacterized protein LOC107794997.
  
     0.477
LOC107763080
Protein LONGIFOLIA 2-like.
  
     0.475
LOC107810763
Protein LONGIFOLIA 1-like.
  
     0.475
LOC107797964
Uncharacterized protein LOC107797964 isoform X1.
  
     0.474
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.