STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107794172WEB family protein At1g12150-like. (604 aa)    
Predicted Functional Partners:
LOC107789286
Paramyosin-like.
    
 0.641
LOC107821869
Double-stranded RNA-binding protein 6-like.
  
 
   0.434
LOC107816991
Synaptonemal complex protein 1-like.
  
     0.427
LOC107797769
Wall-associated receptor kinase 2-like.
  
 
  0.421
LOC107778024
UPF0481 protein At3g47200-like.
  
 
  0.418
LOC107763298
Wall-associated receptor kinase 2-like.
  
 
  0.416
LOC107791878
F-box protein PP2-B11-like.
  
 
  0.408
LOC107810470
Synaptonemal complex protein 1-like.
  
     0.406
LOC107764310
Putative UPF0481 protein At3g02645.
  
     0.403
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
Server load: low (16%) [HD]