STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10779439460S ribosomal protein L6, mitochondrial-like; Belongs to the universal ribosomal protein uL6 family. (102 aa)    
Predicted Functional Partners:
LOC107778781
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.982
LOC107802919
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.982
LOC107787227
60S ribosomal protein L38-like; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.980
LOC107815038
60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.980
LOC107801799
60S ribosomal protein L44; Belongs to the eukaryotic ribosomal protein eL42 family.
   
 0.979
LOC107812846
60S ribosomal protein L44-like; Belongs to the eukaryotic ribosomal protein eL42 family.
   
 0.979
rps2
Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
  
 
 0.972
LOC107761040
50S ribosomal protein L5, chloroplastic.
 
 0.971
LOC107799618
40S ribosomal protein S28-like.
   
 
 0.970
LOC107800747
40S ribosomal protein S28.
   
 
 0.970
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.