STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107794788Uncharacterized protein LOC107794788. (419 aa)    
Predicted Functional Partners:
LOC107824973
LOB domain-containing protein 6-like.
  
     0.524
LOC107802176
LOB domain-containing protein 6-like.
  
     0.523
LOC107769821
PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like.
  
     0.494
LOC107793831
PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like.
  
     0.489
LOC107771031
Mitochondrial outer membrane protein porin of 36 kDa-like.
  
 
  0.487
LOC107771732
Transcription factor TGA2-like isoform X1.
  
     0.482
LOC107792106
Transcription factor TGA2-like.
  
     0.482
LOC107798783
ETHYLENE INSENSITIVE 3-like 1 protein.
  
     0.480
LOC107767986
Uncharacterized protein LOC107767986.
  
     0.477
LOC107826762
ETHYLENE INSENSITIVE 3-like 1 protein.
  
     0.476
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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