STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107794850Uncharacterized protein LOC107794850 isoform X1. (341 aa)    
Predicted Functional Partners:
LOC107801906
SKP1-interacting partner 15-like.
  
     0.511
LOC107790293
SKP1-interacting partner 15-like.
  
     0.510
LOC107831089
Uncharacterized protein LOC107831089.
  
     0.510
LOC107831088
Uncharacterized protein LOC107831088.
  
     0.507
LOC107792735
Uncharacterized protein LOC107792735.
  
     0.499
LOC107764570
Uncharacterized protein LOC107764570.
  
     0.498
LOC107785719
Protein CHLOROPLAST IMPORT APPARATUS 2-like.
  
     0.488
LOC107798546
Transcription factor bHLH128-like isoform X1.
  
     0.487
LOC107803242
Probable receptor-like protein kinase At5g24010.
  
     0.487
LOC107773412
28 kDa heat- and acid-stable phosphoprotein-like.
      
 0.485
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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