STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107795937Uncharacterized protein LOC107795937. (309 aa)    
Predicted Functional Partners:
LOC107769224
Serine/threonine-protein phosphatase 4 regulatory subunit 2-A-like isoform X1.
  
 
 0.807
LOC107776329
Serine/threonine-protein phosphatase 4 regulatory subunit 2-like isoform X1.
    
 0.767
LOC107779173
Protein phosphatase inhibitor 2-like.
    
 
 0.711
LOC107786850
RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like.
    
 
 0.643
LOC107822792
RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like.
    
 
 0.643
LOC107808220
Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
    
 
 0.604
LOC107818780
Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
    
 
 0.604
LOC107826656
Protein TIME FOR COFFEE-like.
    
 0.597
LOC107814041
Nuclear inhibitor of protein phosphatase 1-like.
   
 
 0.592
LOC107822132
Nuclear inhibitor of protein phosphatase 1-like.
   
 
 0.592
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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