STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107796554Uncharacterized protein LOC107796554. (299 aa)    
Predicted Functional Partners:
LOC107802120
Zinc finger MYM-type protein 1-like.
  
     0.521
LOC107815518
Zinc finger MYM-type protein 1-like.
  
     0.517
LOC107830553
Zinc finger MYM-type protein 1-like.
  
     0.515
LOC107790553
Zinc finger MYM-type protein 1-like.
  
     0.511
LOC107778741
Uncharacterized protein LOC107778741.
  
     0.507
LOC107791008
Uncharacterized protein LOC107791008.
  
     0.505
LOC107797252
Zinc finger MYM-type protein 1-like.
  
     0.505
LOC107808446
Zinc finger MYM-type protein 1-like.
  
     0.503
LOC107812211
Uncharacterized protein LOC107812211.
  
     0.501
LOC107812669
Uncharacterized protein LOC107812669.
  
     0.495
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.