STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107796549Uncharacterized protein LOC107796549. (142 aa)    
Predicted Functional Partners:
LOC107829211
Uncharacterized protein LOC107829211.
  
     0.506
LOC107770648
Uncharacterized protein LOC107770648.
  
     0.493
LOC107814081
Uncharacterized protein LOC107814081.
  
     0.481
LOC107765604
Uncharacterized protein LOC107765604.
  
     0.477
LOC107781777
Uncharacterized protein LOC107781777.
  
     0.471
LOC107770622
Uncharacterized protein LOC107770622.
  
     0.470
LOC107803690
Uncharacterized protein K02A2.6-like.
  
     0.463
LOC107777559
Uncharacterized protein LOC107777559.
  
     0.460
LOC107831855
Uncharacterized protein LOC107831855.
  
     0.459
LOC107824949
Uncharacterized protein LOC107824949.
  
     0.451
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.