STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107797011E3 ubiquitin-protein ligase MBR2-like. (720 aa)    
Predicted Functional Partners:
LOC107764793
L10-interacting MYB domain-containing protein-like.
  
     0.490
LOC107803267
L10-interacting MYB domain-containing protein-like.
  
     0.490
LOC107830912
Uncharacterized protein LOC107830912.
  
     0.478
LOC107772274
Uncharacterized protein LOC107772274.
  
     0.475
LOC107784909
Uncharacterized protein LOC107784909 isoform X1.
  
     0.475
LOC107774620
Uncharacterized protein LOC107774620.
  
     0.472
LOC107780416
Uncharacterized protein LOC107780416 isoform X1.
  
     0.472
LOC107763011
Uncharacterized protein LOC107763011.
  
     0.464
LOC107796809
Uncharacterized protein LOC107796809 isoform X1.
  
     0.462
LOC107797771
Uncharacterized protein At3g17950-like.
  
     0.460
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.