STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107797100Glucan endo-1,3-beta-glucosidase 8-like; Belongs to the glycosyl hydrolase 17 family. (474 aa)    
Predicted Functional Partners:
LOC107777825
Actin-related protein 4-like; Belongs to the actin family.
    
 0.541
LOC107807069
Actin-related protein 4-like; Belongs to the actin family.
    
 0.541
LOC107811968
Actin-related protein 4 isoform X1; Belongs to the actin family.
    
 0.541
LOC107818079
Actin-related protein 4-like.
    
 0.541
LOC107767989
SWI/SNF complex component SNF12 homolog isoform X1.
    
 0.533
LOC107797351
SWI/SNF complex component SNF12 homolog.
    
 0.533
LOC107799431
SWI/SNF complex component SNF12 homolog.
    
 0.533
LOC107816546
SWI/SNF complex component SNF12 homolog.
    
 0.533
LOC107764300
Chromatin structure-remodeling complex protein BSH-like.
    
 0.521
LOC107765782
Chromatin structure-remodeling complex protein BSH isoform X1.
    
 0.521
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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