STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107798244Uncharacterized protein LOC107798244. (270 aa)    
Predicted Functional Partners:
LOC107828465
Uncharacterized protein LOC107828465.
  
     0.501
LOC107830239
Uncharacterized protein LOC107830239.
  
     0.495
LOC107821425
Uncharacterized protein LOC107821425.
  
     0.489
LOC107770566
Uncharacterized protein LOC107770566.
  
     0.486
LOC107809844
Uncharacterized protein LOC107809844.
  
     0.484
LOC107760668
Uncharacterized protein LOC107760668.
  
     0.483
LOC107815553
Uncharacterized protein LOC107815553.
  
     0.473
LOC107779160
Uncharacterized protein LOC107779160.
  
     0.470
LOC107769524
Uncharacterized protein LOC107769524.
  
     0.442
LOC107794346
Uncharacterized protein LOC107794346.
  
     0.440
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.