STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107798576Gamma-glutamyltranspeptidase 3-like. (624 aa)    
Predicted Functional Partners:
LOC107832748
Glutathione synthetase.
   
 
 0.976
LOC107821526
Glutathione synthetase.
   
 
 0.976
LOC107782212
Puromycin-sensitive aminopeptidase-like isoform X1.
    
 0.953
LOC107814831
Puromycin-sensitive aminopeptidase-like isoform X1.
    
 0.953
LOC107768570
Leucine aminopeptidase 2, chloroplastic.
     
 0.949
LOC107801578
Leucine aminopeptidase 2, chloroplastic-like.
     
 0.949
LOC107781908
5-oxoprolinase-like.
    
 0.935
LOC107803589
5-oxoprolinase-like.
    
 0.935
LOC107810138
1-Cys peroxiredoxin-like.
  
 
 0.931
LOC107823604
1-Cys peroxiredoxin-like.
  
 
 0.931
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.