STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107799445Increased DNA methylation 2-like; Belongs to the small heat shock protein (HSP20) family. (489 aa)    
Predicted Functional Partners:
LOC107767546
methyl-CpG-binding domain-containing protein 7-like isoform X1.
    
 
 0.649
LOC107785555
methyl-CpG-binding domain-containing protein 7-like isoform X1.
    
 
 0.649
LOC107795320
Uncharacterized protein LOC107795320 isoform X1.
    
 
 0.583
LOC107797638
Uncharacterized protein LOC107797638 isoform X1.
    
 
 0.583
LOC107800808
Uncharacterized protein LOC107800808 isoform X1.
    
 
 0.583
LOC107829855
Uncharacterized protein LOC107829855 isoform X2.
    
 
 0.583
LOC107786345
Alpha-crystallin domain-containing protein 22.3-like.
    
 
0.570
LOC107824211
Alpha-crystallin domain-containing protein 22.3-like.
    
 
0.570
LOC107760342
Uncharacterized protein LOC107760342.
      
 0.542
LOC107785286
Uncharacterized protein LOC107785286.
      
 0.542
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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