STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107800065Uncharacterized protein LOC107800065. (500 aa)    
Predicted Functional Partners:
LOC107828566
Uncharacterized protein LOC107828566.
  
     0.484
LOC107783619
Uncharacterized protein LOC107783619.
  
     0.465
LOC107832785
Uncharacterized protein LOC107832785.
  
     0.454
LOC107760407
Uncharacterized protein LOC107760407.
  
     0.453
LOC107781192
Uncharacterized protein LOC107781192.
  
     0.439
LOC107813564
Uncharacterized protein LOC107813564.
  
     0.430
LOC107769412
Uncharacterized protein LOC107769412.
  
     0.428
LOC107803640
Uncharacterized protein LOC107803640.
  
     0.415
LOC107803870
Uncharacterized protein LOC107803870.
  
     0.415
LOC107790887
Uncharacterized protein LOC107790887.
  
     0.403
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.