STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107800987Uncharacterized protein LOC107800987. (392 aa)    
Predicted Functional Partners:
LOC107772659
Uncharacterized protein LOC107772659.
  
     0.455
LOC107773051
Zinc finger CCCH domain-containing protein 5-like.
  
     0.449
LOC107770798
Uncharacterized protein LOC107770798.
  
     0.431
LOC107803839
Uncharacterized CRM domain-containing protein At3g25440, chloroplastic-like isoform X1.
  
     0.425
LOC107782523
Uncharacterized protein LOC107782523.
  
     0.418
LOC107773151
Uncharacterized protein LOC107773151.
  
     0.410
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.