STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107801237Uncharacterized protein LOC107801237. (130 aa)    
Predicted Functional Partners:
LOC107766170
Pentatricopeptide repeat-containing protein At4g22760-like.
      
 0.545
LOC107810366
Pentatricopeptide repeat-containing protein At4g22760-like.
      
 0.545
LOC107825416
Uncharacterized protein LOC107825416.
  
     0.476
LOC107807525
Uncharacterized protein LOC107807525.
  
     0.457
LOC107802112
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.444
LOC107796475
Cysteine-rich receptor-like protein kinase 42.
  
     0.442
LOC107831025
Protein ECERIFERUM 1-like.
  
     0.438
LOC107827837
Non-specific lipid-transfer protein 4-like.
  
     0.434
LOC107813655
Uncharacterized protein LOC107813655.
  
     0.433
LOC107769557
Protein TIFY 5A-like.
  
     0.428
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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