STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107801429Purine permease 1-like. (193 aa)    
Predicted Functional Partners:
LOC107783627
ultraviolet-B receptor UVR8.
     
 0.756
LOC107768562
Equilibrative nucleotide transporter 3-like.
      
 0.752
LOC107781585
Equilibrative nucleotide transporter 3-like isoform X1.
      
 0.752
LOC107799836
Equilibrative nucleotide transporter 3-like.
      
 0.752
LOC107812818
Equilibrative nucleotide transporter 3-like.
      
 0.752
LOC107813375
Equilibrative nucleotide transporter 3-like isoform X1.
      
 0.752
LOC107776835
Gibberellin receptor GID1C-like.
      
 0.704
LOC107798341
Gibberellin receptor GID1B-like.
      
 0.704
LOC107798874
Gibberellin receptor GID1B-like isoform X1.
      
 0.704
LOC107799015
Gibberellin receptor GID1B-like.
      
 0.704
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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