STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107801571Protein trichome birefringence-like 6. (529 aa)    
Predicted Functional Partners:
LOC107784781
Uncharacterized protein LOC107784781 isoform X1.
    
 
 0.627
LOC107769469
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
  0.608
LOC107796924
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
  0.608
LOC107776423
Hexosyltransferase; Belongs to the glycosyltransferase 8 family.
    
 
 0.523
LOC107812714
Hexosyltransferase; Belongs to the glycosyltransferase 8 family.
    
 
 0.523
LOC107766309
Ankyrin repeat domain-containing protein 29.
    
 0.500
LOC107773604
hsp70-Hsp90 organizing protein 3-like.
    
 0.500
LOC107798719
Histone-lysine N-methyltransferase EHMT1-like.
    
 0.500
LOC107802321
Small glutamine-rich tetratricopeptide repeat-containing protein beta-like.
    
 0.500
LOC107771737
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
      
 0.499
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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