STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107801689Uncharacterized protein LOC107801689. (425 aa)    
Predicted Functional Partners:
LOC107770296
Uncharacterized protein LOC107770296.
  
     0.527
LOC107829141
Uncharacterized protein LOC107829141.
  
     0.526
LOC107773927
Uncharacterized protein LOC107773927.
  
     0.515
LOC107775314
Uncharacterized protein LOC107775314.
  
     0.514
LOC107820480
Uncharacterized protein LOC107820480.
  
     0.514
LOC107814860
Uncharacterized protein LOC107814860.
  
     0.510
LOC107775313
Uncharacterized protein LOC107775313.
  
     0.508
LOC107765356
Uncharacterized protein LOC107765356 isoform X1.
  
     0.505
LOC107809597
F-box/FBD/LRR-repeat protein At1g13570-like.
  
     0.503
LOC107800590
F-box/FBD/LRR-repeat protein At1g13570-like.
  
     0.502
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
Server load: low (12%) [HD]