STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107802196Endoribonuclease Dicer homolog 1; Belongs to the helicase family. Dicer subfamily. (1907 aa)    
Predicted Functional Partners:
LOC107784577
Protein argonaute 7-like; Belongs to the argonaute family.
   
 0.733
LOC107831587
Protein argonaute 7-like; Belongs to the argonaute family.
   
 0.733
LOC107811573
Protein TRANSPORT INHIBITOR RESPONSE 1-like.
    
 
 0.732
LOC107769845
Protein TRANSPORT INHIBITOR RESPONSE 1-like.
    
 
 0.721
LOC107821218
Protein TRANSPORT INHIBITOR RESPONSE 1-like.
    
 
 0.721
LOC107774571
Serrate RNA effector molecule-like isoform X1.
    
 
 0.718
LOC107790573
Serrate RNA effector molecule-like isoform X1.
    
 
 0.718
LOC107791833
Protein TRANSPORT INHIBITOR RESPONSE 1-like.
    
 
 0.715
LOC107818988
Protein TRANSPORT INHIBITOR RESPONSE 1-like.
    
 
 0.715
LOC107788887
30S ribosomal protein S9, chloroplastic-like; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.713
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.