STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107802249Universal stress protein A-like protein. (164 aa)    
Predicted Functional Partners:
LOC107787105
Protein CDC73 homolog.
    
 0.660
LOC107821119
Protein CDC73 homolog.
    
 0.660
LOC107763529
Protein LEO1 homolog isoform X1.
    
 0.632
LOC107765147
Protein LEO1 homolog isoform X1.
    
 0.632
LOC107768468
Protein PAF1 homolog.
   
 0.629
LOC107826626
Protein PAF1 homolog.
   
 0.629
LOC107773276
Uncharacterized protein LOC107773276.
    
 0.553
LOC107773426
Tetratricopeptide repeat protein SKI3-like.
    
 0.553
LOC107773568
Tetratricopeptide repeat protein SKI3-like.
    
 0.553
LOC107773635
Tetratricopeptide repeat protein SKI3-like.
    
 0.553
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.