STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107802891VAN3-binding protein-like. (388 aa)    
Predicted Functional Partners:
LOC107824917
Uncharacterized protein F59B10.2-like.
  
     0.527
LOC107782307
Uncharacterized protein LOC107782307.
  
     0.526
LOC107808893
Uncharacterized protein LOC107808893.
  
     0.521
LOC107822041
Uncharacterized protein DDB_G0271670-like isoform X1.
  
     0.521
LOC107772291
Uncharacterized protein LOC107772291.
  
     0.517
LOC107816668
Uncharacterized protein LOC107816668.
  
     0.492
LOC107816617
Vacuolar protein sorting-associated protein 27-like.
  
     0.490
LOC107761679
Uncharacterized protein LOC107761679 isoform X1.
  
     0.487
LOC107760146
Uncharacterized protein LOC107760146.
  
     0.480
LOC107785192
Uncharacterized protein LOC107785192 isoform X1.
  
     0.471
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.