STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107803011Protein IQ-DOMAIN 14-like. (461 aa)    
Predicted Functional Partners:
LOC107765417
Transcription factor bHLH143-like.
  
     0.520
LOC107772932
Transcription factor bHLH143-like.
  
     0.511
LOC107764853
Probable membrane-associated kinase regulator 6.
  
     0.502
LOC107816154
Probable membrane-associated kinase regulator 6 isoform X1.
  
     0.502
LOC107770674
Senescence-associated carboxylesterase 101-like isoform X1.
  
     0.491
LOC107804937
Transcription factor bHLH145-like isoform X1.
  
     0.491
LOC107759917
Senescence-associated carboxylesterase 101-like isoform X1.
  
     0.485
LOC107762371
Uncharacterized protein LOC107762371.
  
     0.480
LOC107813242
Uncharacterized protein LOC107813242.
  
     0.480
LOC107829333
Uncharacterized protein LOC107829333.
  
     0.479
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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