STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107803690Uncharacterized protein K02A2.6-like. (245 aa)    
Predicted Functional Partners:
LOC107803648
Uncharacterized protein LOC107803648.
  
     0.511
LOC107802553
Uncharacterized protein LOC107802553.
  
     0.506
LOC107788172
Uncharacterized protein LOC107788172.
  
     0.499
LOC107769510
Uncharacterized protein LOC107769510.
  
     0.463
LOC107796549
Uncharacterized protein LOC107796549.
  
     0.463
LOC107765915
Uncharacterized protein LOC107765915.
  
     0.440
LOC107808964
Uncharacterized protein LOC107808964.
  
     0.433
LOC107815506
Uncharacterized protein LOC107815506.
  
     0.424
LOC107773757
Uncharacterized protein LOC107773757.
  
     0.422
LOC107830732
Uncharacterized protein LOC107830732.
  
     0.420
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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