STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107803889Uncharacterized protein LOC107803889. (555 aa)    
Predicted Functional Partners:
LOC107778683
Protein GAMETE EXPRESSED 3-like isoform X1.
      
 0.551
LOC107783775
Protein GAMETE EXPRESSED 3-like.
      
 0.551
LOC107797811
Nuclear pore complex protein GP210-like.
      
 0.551
LOC107814409
Nuclear pore complex protein GP210-like.
      
 0.551
LOC107779606
Sialyltransferase-like protein 1; Belongs to the glycosyltransferase 29 family.
      
 0.545
LOC107811803
Sialyltransferase-like protein 1 isoform X1; Belongs to the glycosyltransferase 29 family.
      
 0.545
LOC107804671
Protein GAMETE EXPRESSED 1-like.
      
 0.541
LOC107812574
Protein GAMETE EXPRESSED 1.
      
 0.541
LOC107828372
Small G protein signaling modulator 1-like isoform X1.
  
     0.488
LOC107767684
Small G protein signaling modulator 1 isoform X1.
  
     0.486
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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