LOC107803952 protein (Nicotiana tabacum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC107803952

Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790. (310 aa)

Predicted Functional Partners:

LOC107801399

0.515

LOC107794503

0.505

LOC107811271

0.493

LOC107808836

0.483

LOC107798247

0.482

LOC107799975

0.482

LOC107806366

0.482

LOC107786179

0.481

LOC107781648

0.480

LOC107815989

0.479

Your Current Organism:

Nicotiana tabacum

NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC107781648	LOC107803952	A0A1S3Z0F9	A0A1S4B369	Plant intracellular Ras-group-related LRR protein 7-like.	Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790.	0.480
LOC107786179	LOC107794503	A0A1S3ZFR0	A0A1S4A7C9	Leucine-rich repeat receptor-like protein kinase PEPR2.	Leucine-rich repeat extensin-like protein 4.	0.502
LOC107786179	LOC107801399	A0A1S3ZFR0	A0A1S4AUG1	Leucine-rich repeat receptor-like protein kinase PEPR2.	Probable leucine-rich repeat receptor-like protein kinase At1g35710.	0.458
LOC107786179	LOC107803952	A0A1S3ZFR0	A0A1S4B369	Leucine-rich repeat receptor-like protein kinase PEPR2.	Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790.	0.481
LOC107794503	LOC107786179	A0A1S4A7C9	A0A1S3ZFR0	Leucine-rich repeat extensin-like protein 4.	Leucine-rich repeat receptor-like protein kinase PEPR2.	0.502
LOC107794503	LOC107801399	A0A1S4A7C9	A0A1S4AUG1	Leucine-rich repeat extensin-like protein 4.	Probable leucine-rich repeat receptor-like protein kinase At1g35710.	0.494
LOC107794503	LOC107803952	A0A1S4A7C9	A0A1S4B369	Leucine-rich repeat extensin-like protein 4.	Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790.	0.505
LOC107798247	LOC107803952	A0A1S4AJ34	A0A1S4B369	Plant intracellular Ras-group-related LRR protein 6-like.	Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790.	0.482
LOC107798247	LOC107811271	A0A1S4AJ34	A0A1S4BS80	Plant intracellular Ras-group-related LRR protein 6-like.	TMV resistance protein N-like.	0.522
LOC107799975	LOC107803952	A0A1S4APW8	A0A1S4B369	Plant intracellular Ras-group-related LRR protein 6-like.	Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790.	0.482
LOC107799975	LOC107811271	A0A1S4APW8	A0A1S4BS80	Plant intracellular Ras-group-related LRR protein 6-like.	TMV resistance protein N-like.	0.520
LOC107801399	LOC107786179	A0A1S4AUG1	A0A1S3ZFR0	Probable leucine-rich repeat receptor-like protein kinase At1g35710.	Leucine-rich repeat receptor-like protein kinase PEPR2.	0.458
LOC107801399	LOC107794503	A0A1S4AUG1	A0A1S4A7C9	Probable leucine-rich repeat receptor-like protein kinase At1g35710.	Leucine-rich repeat extensin-like protein 4.	0.494
LOC107801399	LOC107803952	A0A1S4AUG1	A0A1S4B369	Probable leucine-rich repeat receptor-like protein kinase At1g35710.	Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790.	0.515
LOC107803952	LOC107781648	A0A1S4B369	A0A1S3Z0F9	Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790.	Plant intracellular Ras-group-related LRR protein 7-like.	0.480
LOC107803952	LOC107786179	A0A1S4B369	A0A1S3ZFR0	Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790.	Leucine-rich repeat receptor-like protein kinase PEPR2.	0.481
LOC107803952	LOC107794503	A0A1S4B369	A0A1S4A7C9	Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790.	Leucine-rich repeat extensin-like protein 4.	0.505
LOC107803952	LOC107798247	A0A1S4B369	A0A1S4AJ34	Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790.	Plant intracellular Ras-group-related LRR protein 6-like.	0.482
LOC107803952	LOC107799975	A0A1S4B369	A0A1S4APW8	Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790.	Plant intracellular Ras-group-related LRR protein 6-like.	0.482
LOC107803952	LOC107801399	A0A1S4B369	A0A1S4AUG1	Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790.	Probable leucine-rich repeat receptor-like protein kinase At1g35710.	0.515