STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107804100Chitin-inducible gibberellin-responsive protein 1-like; Belongs to the GRAS family. (500 aa)    
Predicted Functional Partners:
LOC107776538
BTB/POZ domain-containing protein At3g05675-like.
  
     0.527
LOC107807474
BTB/POZ domain-containing protein At3g05675-like isoform X1.
  
     0.522
LOC107806935
Uncharacterized protein LOC107806935.
  
    0.521
LOC107818388
Uncharacterized protein LOC107818388.
  
     0.509
LOC107764660
Protein BASIC PENTACYSTEINE3-like.
  
     0.507
LOC107822345
Uncharacterized protein LOC107822345.
  
     0.501
LOC107771178
Uncharacterized protein LOC107771178 isoform X1; Belongs to the small heat shock protein (HSP20) family.
  
     0.500
LOC107780193
Uncharacterized protein LOC107780193; Belongs to the small heat shock protein (HSP20) family.
  
     0.500
LOC107761097
BTB/POZ domain-containing protein At5g03250-like.
  
     0.494
LOC107764483
Uncharacterized protein LOC107764483.
  
     0.494
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
Server load: low (18%) [HD]